dgenies.result¶
- dgenies.result.init(id_res)¶
Initialise app for result app
- Arguments
id_res (
string()
) – job id
- dgenies.result.add_to_list()¶
Update list of results from cookie
- dgenies.result.remove_job_from_cookie(job)¶
Remove a job in cookie
- Arguments
job (
string()
) – job id to remove
dgenies.result.controls¶
- dgenies.result.controls.init()¶
Initialise controls of the result page
- dgenies.result.controls.delete_job()¶
Ask confirm for delete current job
- dgenies.result.controls.do_delete_job()¶
Delete current job (confirmed)
- dgenies.result.controls.launch_hide_noise()¶
Hide noise
- dgenies.result.controls.launch_reverse_contig()¶
Build reverse of a contig
- dgenies.result.controls.launch_sort_contigs()¶
Build contigs sort
- dgenies.result.controls.select_zone()¶
Select zone with select boxes
- dgenies.result.controls.summary()¶
Build summary
dgenies.result.export¶
- dgenies.result.export.ask_export_fasta()¶
Show export dialog
- dgenies.result.export.dl_fasta(gzip)¶
Download query fasta file
- Arguments
gzip (
boolean()
) – if true, gzip the file
- dgenies.result.export.export()¶
Manage exports
- dgenies.result.export.export_association_table()¶
Download association table between queries and targets
- dgenies.result.export.export_backup_file()¶
Download backup file of the project
- dgenies.result.export.export_fasta(compress)¶
Export fasta file
- Arguments
compress (
boolean()
) – if true compress (gzip) the file
- dgenies.result.export.export_no_association_file(to:)¶
Export list of contigs with no association with any target or any query
- Arguments
to: (
string()
) – query or target
- dgenies.result.export.export_offline_viewer()¶
Download offline viewer
- dgenies.result.export.export_paf()¶
Download PAF alignment file
- dgenies.result.export.export_png()¶
Export dot plot as PNG
- dgenies.result.export.export_query_as_reference_fasta_standalone()¶
Export query like reference fasta file (standalone mode)
- dgenies.result.export.export_query_as_reference_fasta_webserver()¶
Export query like reference fasta file (webserver mode)
- dgenies.result.export.export_svg()¶
Export dot plot as SVG
- dgenies.result.export.get_svg(width)¶
Build SVG tag and content
- Arguments
width (
string()
) – svg width size (with unit [px])
- Returns
string – svg tag and content
- dgenies.result.export.save_file(blob, format)¶
Save file
- Arguments
blob (
Blob()
) – file content to saveformat (
string()
) – file format
dgenies.result.summary¶
- dgenies.result.summary.export_png()¶
Export summary to png
- dgenies.result.summary.export_svg()¶
Export summary to svg
- dgenies.result.summary.export_tsv()¶
Export summary to tsv
- dgenies.result.summary.get_svg()¶
Get SVG picture of the summary
- Returns
string – svg picture
- dgenies.result.summary.save_file(blob, format)¶
Save to a file
- Arguments
blob – data to save
format (
string()
) – file format
- dgenies.result.summary.show(percents:)¶
Show summary window
- Arguments
percents: (
object()
) – percents for each identity category
- dgenies.result.summary._get_label(percent_class)¶
Get label of the percent class
- Arguments
percent_class (
string()
) – percent class
- Returns
string – percent class label