dgenies.result¶
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dgenies.result.
init
(id_res)¶ Initialise app for result app
Arguments: - id_res (string) – job id
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dgenies.result.
add_to_list
()¶ Update list of results from cookie
Remove a job in cookie
Arguments: - job (string) – job id to remove
dgenies.result.controls¶
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dgenies.result.controls.
init
()¶ Initialise controls of the result page
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dgenies.result.controls.
delete_job
()¶ Ask confirm for delete current job
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dgenies.result.controls.
do_delete_job
()¶ Delete current job (confirmed)
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dgenies.result.controls.
launch_hide_noise
()¶ Hide noise
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dgenies.result.controls.
launch_reverse_contig
()¶ Build reverse of a contig
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dgenies.result.controls.
launch_sort_contigs
()¶ Build contigs sort
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dgenies.result.controls.
select_zone
()¶ Select zone with select boxes
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dgenies.result.controls.
summary
()¶ Build summary
dgenies.result.export¶
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dgenies.result.export.
ask_export_fasta
()¶ Show export dialog
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dgenies.result.export.
dl_fasta
(gzip)¶ Download query fasta file
Arguments: - gzip (boolean) – if true, gzip the file
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dgenies.result.export.
export
()¶ Manage exports
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dgenies.result.export.
export_association_table
()¶ Download association table between queries and targets
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dgenies.result.export.
export_backup_file
()¶ Download backup file of the project
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dgenies.result.export.
export_fasta
(compress)¶ Export fasta file
Arguments: - compress (boolean) – if true compress (gzip) the file
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dgenies.result.export.
export_no_association_file
(to:)¶ Export list of contigs with no association with any target or any query
Arguments: - to: (string) – query or target
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dgenies.result.export.
export_offline_viewer
()¶ Download offline viewer
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dgenies.result.export.
export_paf
()¶ Download PAF alignment file
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dgenies.result.export.
export_png
()¶ Export dot plot as PNG
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dgenies.result.export.
export_query_as_reference_fasta_standalone
()¶ Export query like reference fasta file (standalone mode)
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dgenies.result.export.
export_query_as_reference_fasta_webserver
()¶ Export query like reference fasta file (webserver mode)
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dgenies.result.export.
export_svg
()¶ Export dot plot as SVG
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dgenies.result.export.
get_svg
(width)¶ Build SVG tag and content
Arguments: - width (string) – svg width size (with unit [px])
Returns: string – svg tag and content
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dgenies.result.export.
save_file
(blob, format)¶ Save file
Arguments: - blob (Blob) – file content to save
- format (string) – file format
dgenies.result.summary¶
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dgenies.result.summary.
export_png
()¶ Export summary to png
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dgenies.result.summary.
export_svg
()¶ Export summary to svg
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dgenies.result.summary.
export_tsv
()¶ Export summary to tsv
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dgenies.result.summary.
get_svg
()¶ Get SVG picture of the summary
Returns: string – svg picture
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dgenies.result.summary.
save_file
(blob, format)¶ Save to a file
Arguments: - blob – data to save
- format (string) – file format
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dgenies.result.summary.
show
(percents:)¶ Show summary window
Arguments: - percents: (object) – percents for each identity category
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dgenies.result.summary.
_get_label
(percent_class)¶ Get label of the percent class
Arguments: - percent_class (string) – percent class
Returns: string – percent class label