dgenies.result

dgenies.result.init(id_res)

Initialise app for result app

Arguments

  • id_res (string()) – job id

dgenies.result.add_to_list()

Update list of results from cookie

Remove a job in cookie

Arguments

  • job (string()) – job id to remove

dgenies.result.controls

dgenies.result.controls.init()

Initialise controls of the result page

dgenies.result.controls.delete_job()

Ask confirm for delete current job

dgenies.result.controls.do_delete_job()

Delete current job (confirmed)

dgenies.result.controls.launch_hide_noise()

Hide noise

dgenies.result.controls.launch_reverse_contig()

Build reverse of a contig

dgenies.result.controls.launch_sort_contigs()

Build contigs sort

dgenies.result.controls.select_zone()

Select zone with select boxes

dgenies.result.controls.summary()

Build summary

dgenies.result.export

dgenies.result.export.ask_export_fasta()

Show export dialog

dgenies.result.export.dl_fasta(gzip)

Download query fasta file

Arguments

  • gzip (boolean()) – if true, gzip the file

dgenies.result.export.export()

Manage exports

dgenies.result.export.export_association_table()

Download association table between queries and targets

dgenies.result.export.export_backup_file()

Download backup file of the project

dgenies.result.export.export_fasta(compress)

Export fasta file

Arguments

  • compress (boolean()) – if true compress (gzip) the file

dgenies.result.export.export_no_association_file(to:)

Export list of contigs with no association with any target or any query

Arguments

  • to: (string()) – query or target

dgenies.result.export.export_offline_viewer()

Download offline viewer

dgenies.result.export.export_paf()

Download PAF alignment file

dgenies.result.export.export_png()

Export dot plot as PNG

dgenies.result.export.export_query_as_reference_fasta_standalone()

Export query like reference fasta file (standalone mode)

dgenies.result.export.export_query_as_reference_fasta_webserver()

Export query like reference fasta file (webserver mode)

dgenies.result.export.export_svg()

Export dot plot as SVG

dgenies.result.export.get_svg(width)

Build SVG tag and content

Arguments

  • width (string()) – svg width size (with unit [px])

Returns

string – svg tag and content

dgenies.result.export.save_file(blob, format)

Save file

Arguments

  • blob (Blob()) – file content to save

  • format (string()) – file format

dgenies.result.summary

dgenies.result.summary.export_png()

Export summary to png

dgenies.result.summary.export_svg()

Export summary to svg

dgenies.result.summary.export_tsv()

Export summary to tsv

dgenies.result.summary.get_svg()

Get SVG picture of the summary

Returns

string – svg picture

dgenies.result.summary.save_file(blob, format)

Save to a file

Arguments

  • blob – data to save

  • format (string()) – file format

dgenies.result.summary.show(percents:)

Show summary window

Arguments

  • percents: (object()) – percents for each identity category

dgenies.result.summary._get_label(percent_class)

Get label of the percent class

Arguments

  • percent_class (string()) – percent class

Returns

string – percent class label